BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002D10LP1|AL424962
(1055 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1791 2029 0.0
>3x_Contig1791
Length = 39945
Score = 2029 bits (1018), Expect = 0.0
Identities = 1044/1056 (98%), Gaps = 2/1056 (0%)
Strand = Plus / Minus
Query: 1 tttgttttttctgctgatctccgttatatcgccagcggtaatgggaaattgagttgtgct 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 24703 tttgttttttctgctgatctccgttatatcgccagcgg-aatgggaaattgagttgtgct 24645
Query: 61 tatatcatcacacccgtgcatcacatatttgtcgtttcttttcagttctttttcccttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24644 tatatcatcacacccgtgcatcacatatttgtcgtttcttttcagttctttttcccttta 24585
Query: 121 tttcagtgcttgagcatagtaagaccgatgcgatgcgatgagatgcaataaatacatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24584 tttcagtgcttgagcatagtaagaccgatgcgatgcgatgagatgcaataaatacatctt 24525
Query: 181 accaacatgacaaaggaaacacatataagcatatatatatatatrrrkvtctctaacata 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 24524 accaacatgacaaaggaaacacatataagcatatatatatatataaatatctctaacata 24465
Query: 241 cttgtatctacgatagcatttattatattggctcatttcttattcaaaggagctaagcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24464 cttgtatctacgatagcatttattatattggctcatttcttattcaaaggagctaagcca 24405
Query: 301 atcgttttgagcttcggtgggattagagtttagccagaattgccttatctcttgatttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24404 atcgttttgagcttcggtgggattagagtttagccagaattgccttatctcttgatttca 24345
Query: 361 attcaaatatggcagctactgctaacaagaagcatgacagtcagtttagagttgctacta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24344 attcaaatatggcagctactgctaacaagaagcatgacagtcagtttagagttgctacta 24285
Query: 421 ggattatcacggaggcaacaatcacgccactagctgcgaacaccagcaagagtagtggga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24284 ggattatcacggaggcaacaatcacgccactagctgcgaacaccagcaagagtagtggga 24225
Query: 481 gtgttacrgatgartccgatatcgatggaggcgacgctttgttctctccttttgcttccg 540
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24224 gtgttacagatgaatccgatatcgatggaggcgacgctttgttctctccttttgcttccg 24165
Query: 541 atgtgggttctggtgatgaccaggatatagaragggagctactgggtgacgttaccgatg 600
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 24164 atgtgggttctggtgatgaccaggatatagaaagggagctactgggtgacgttaccgatg 24105
Query: 601 acgatgatgctcttgatttcgaatggcttatgggtgcatcgaaaccgaaacgattcatgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24104 acgatgatgctcttgatttcgaatggcttatgggtgcatcgaaaccgaaacgattcatgc 24045
Query: 661 taaaaccggtgacctctgaagatcataccggtaatgcgagggaaatccgtcatgcggata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24044 taaaaccggtgacctctgaagatcataccggtaatgcgagggaaatccgtcatgcggata 23985
Query: 721 tcagcttctcgcatgctttgcagggaataatacaaccagatacaactgatgatgtagagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23984 tcagcttctcgcatgctttgcagggaataatacaaccagatacaactgatgatgtagagt 23925
Query: 781 tgccaattaatgaagatttttggaaagatgttgacacttctgtggcagaggctaatttgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23924 tgccaattaatgaagatttttggaaagatgttgacacttctgtggcagaggctaatttgg 23865
Query: 841 acatgccactggatttctctgctgccatttcaccatccggtgcgaatttaagctcagggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23864 acatgccactggatttctctgctgccatttcaccatccggtgcgaatttaagctcagggt 23805
Query: 901 ctgtcatcggtgaccacaatggtatcgatggttcattccaggtttctgaaacggtagaag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23804 ctgtcatcggtgaccacaatggtatcgatggttcattccaggtttctgaaacggtagaag 23745
Query: 961 atttcattaagactgatacctcgatctctcactcagcttctactgtggggtcagatgttc 1020
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 23744 atttcattaagactgatacctcgatctctcactcagcttctactgtgggttcagatgttc 23685
Query: 1021 attctcagttcatgtat-ctatcaagaaatkgagtt 1055
||||||||||||||||| |||||||||||| |||||
Sbjct: 23684 attctcagttcatgtatcctatcaagaaattgagtt 23649
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,332
Number of Sequences: 1807
Number of extensions: 10332
Number of successful extensions: 188
Number of sequences better than 1.0e-20: 1
length of query: 1055
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1039
effective length of database: 10,329,639
effective search space: 10732494921
effective search space used: 10732494921
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)